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The inner workings of an enzyme

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Summary

Predictive understanding for how a particular amino acid sequence encodes enzymatic function is a grand challenge in molecular biology, with profound impacts in fields ranging from industrial biotechnology, computational protein design, and agriculture to predictive identification of disease mutations (1) and medicinal chemistry. Innovative methods for high-throughput and quantitative measurements of different aspects of enzymatic function are needed to achieve this goal. On page 411 of this issue, Markin et al. (2) describe a laboratory-on-a-chip platform called High-Throughput Microfluidic Enzyme Kinetics (HT-MEK) as a step in this direction. The technique allows high-fidelity in vitro biochemical and biophysical characterization of more than 1000 mutants of the model enzyme PafA (phosphate-irrepressible alkaline phosphatase of Flavobacterium). HT-MEK identifies partially overlapping yet distinct networks of amino acids that undergird individual reaction steps of PafA, illuminating the mechanistic basis of catalysis for this enzyme.

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